2025年 会前研讨会*

Bio-IT World 将于 4 月 2 日星期一上午和下午举办会前研讨会。该研讨会具有指导性和互动性,提供有关特定主题的深入资讯。它允许一对一的互动,并且是探索周四至周五的主要会议分会中可能未涵盖的技术方面的绝佳机会。

*需要单独报名


2025年4月2日(星期三) 早上 9:00 - 下午 12:00

W1: FAIRification Lab—Applying FAIR Principles to Enhance Data Stewardship

Detailed Agenda
This hands-on workshop provides an interactive exploration of the FAIR (Findable, Accessible, Interoperable, and Reusable) data landscape, with a focus on real-world applications. During the session, three expert speakers from prominent data stewardship projects will share their experiences and insights into how FAIR principles are being applied. Following the presentations, attendees will break into small groups for a practical “FAIRification” exercise, working with provided datasets to apply FAIR principles and gain a deeper understanding of the process.
Munazah Andrabi, PhD, Data & Community Manager, The University of Manchester
Ishwar Chandramouliswaran, Program Director, Office of Data Science Strategy, NIH
Andrew Hasley, PhD, Program Analyst, Office of Data Science Strategy, NIH
Nick Juty, PhD, Senior Research Technology Manager, eScience Lab, University of Manchester
Nick Lynch, PhD, Founder & CTO, Curlew Research; Member, FAIRplus Consortium
Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance
Philippe Rocca-Serra, PhD, Senior Director FAIR Collaborations R&D, AstraZeneca, Cambridge UK; Associate Member of Faculty, Oxford e-Research Centre, University of Oxford
Susanna-Assunta Sansone, PhD, Professor of Data Readiness, Department of Engineering Science; Academic Lead for Research Practice, University of Oxford
9:00 am

FAIRification Lab—Applying FAIR Principles to Enhance Data Stewardship

Munazah Andrabi, PhD, Data & Community Manager, The University of Manchester

Ishwar Chandramouliswaran, Program Director, Office of Data Science Strategy, NIH

Andrew Hasley, PhD, Program Analyst, Office of Data Science Strategy, NIH

Nick Juty, PhD, Senior Research Technology Manager, eScience Lab, University of Manchester

Nick Lynch, PhD, Founder & CTO, Curlew Research; Member, FAIRplus Consortium

Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance

Philippe Rocca-Serra, PhD, Senior Director FAIR Collaborations R&D, AstraZeneca, Cambridge UK; Associate Member of Faculty, Oxford e-Research Centre, University of Oxford

Susanna-Assunta Sansone, PhD, Professor of Data Readiness, Department of Engineering Science; Academic Lead for Research Practice, University of Oxford

This hands-on workshop offers an interactive dive into the FAIR (Findable, Accessible, Interoperable, and Reusable) data landscape. Featuring three expert speakers from leading data stewardship projects, the session will focus on applying FAIR principles. Attendees will also engage in a practical “FAIRification” exercise, working in small groups with provided datasets to understand how to apply these principles in real-world scenarios and enhance data usability.

INSTRUCTOR BIOGRAPHIES:

Munazah Andrabi, PhD, Data & Community Manager, The University of Manchester

Experienced Community and Data Manager, leading significant data management initiatives for ELIXIR and serving on the management and steering committees of the ELIXIR-UK node. As a leading editor of RDMkit, the ELIXIR data management toolkit for best practices in life sciences, I’m actively involved with the content creation process and editorial responsibilities, ensuring high-quality of data management content. Co-lead of the ELIXIR Research Data Management (RDM) community, fostering and facilitating the usage of the data management resources to promote the application of FAIR principles. Community lead on the ELIXR Training eSupport System (TeSS), a training platform developed to provide a one-stop shop for trainers and trainees to discover online content. In addition, I’m responsible for the product management and community development of the data management platform, FAIRDOM-SEEK, handling its major users spread across the world. With a Ph.D. in bioinformatics from Japan and extensive experience working in different countries and cultures, I engage with a wide range of stakeholders in the field of life sciences.

Ishwar Chandramouliswaran, Program Director, Office of Data Science Strategy, NIH

Ishwar Chandramouliswaran is a Program Director and technical lead for the strategy, planning, coordination and oversight of establishing a FAIR data ecosystem at the NIH Office of Director, Office of Data Science Strategy (ODSS).

Andrew Hasley, PhD, Program Analyst, Office of Data Science Strategy, NIH

Nick Juty, PhD, Senior Research Technology Manager, eScience Lab, University of Manchester

Nick Juty is a Senior Research Technical Manager in the eScience Lab, based in the Department of Computer Science at The University of Manchester. He is involved in numerous EU projects relating to aspects of FAIR and interoperability, particularly with respect to identifier systems and metadata. Nick previously worked at EMBL-EBI where he helped create the identifiers.org identifier resolution system. Nick holds a PhD in Biochemistry from the University of Southampton.

Nick Lynch, PhD, Founder & CTO, Curlew Research; Member, FAIRplus Consortium

Dr. Lynch has over 25 years’ experience in Data science & Informatics in various start-ups and biopharma. He is interested in making data more accessible for better analysis, and established Curlew Research in 2014, working with pharma/biotech and life science informatics/data science companies.

Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance

Giovanni Nisato is a Pistoia Alliance Associate where he currently manages the FAIR implementation project. Giovanni works as a consultant for bio-pharmaceutical organizations, innovation networks and digital health start-ups. He has 25 years’ experience in collaborative innovations in international settings across diverse industries. Affiliate professor at the Grenoble School of Management’s Biopharma Program, Giovanni holds a PhD in physics and is a certified Project Management Professional (PMP/PMI).

Philippe Rocca-Serra, PhD, Senior Director FAIR Collaborations R&D, AstraZeneca, Cambridge UK; Associate Member of Faculty, Oxford e-Research Centre, University of Oxford

Philippe Rocca-Serra graduated from the Ecole Nationale Supérieure d'Agronomie de Rennes, France with a Diplôme d'Ingénieur before completing a PhD in Molecular Genetics from the University of Bordeaux (2001), during which he was supported by EMBO fellowship supporting collaboration the University of Oslo. He then joined the EMBL European Bioinformatics Institute (EBI), contributing to the design and development of databases, tools, and data standards for communicating scientific results generated by Omics technologies. He joined the Oxford e-Research Centre in 2010 and has continued developing his activities on open data and open science.

Susanna-Assunta Sansone, PhD, Professor of Data Readiness, Department of Engineering Science; Academic Lead for Research Practice, University of Oxford

Since 2001, Susanna operates in the area of data interoperability, research integrity, and the evolution of scholarly publishing, working with and for researchers, service providers, journal publishers, library science experts, funders, and learned societies in the academic as well as in the commercial and governmental setting. With her Data Readiness Group (https://datareadiness.eng.ox.ac.uk), at the University of Oxford, she: (i) enables science by investigating and implementing methods, standards and tools to improve data curation and publication; (ii) influences data policies by leading and promoting guiding principles for data management and stewardship to support data reuse; (iii) prepares the new generation of scientists by creating and delivering educational material, to address the glaring lack of courses in these specialized subjects. An author of the FAIR Principles, Susanna has initiated and participated in a variety of community activities across disciplines, including: founder of the Nature's Scientific Data journal, member of several Boards of Directors (e.g. Dryad, Centre of Open Science) and formal standardization groups (e.g. ISO TC/276, EOSC FAIR Metrics and Data Quality Task Force). In the context of ELIXIR, she a co-lead of the ELIXIR Interoperability Platform (https://elixir-europe.org/platforms/interoperability).

W2: Foundations of Quantum Computing in Drug Discovery

Detailed Agenda
Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals
9:00 am

Foundations of Quantum Computing in Drug Discovery

Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals

Quantum computing is poised to revolutionize drug discovery by accelerating computations and unlocking new possibilities for pharmaceutical innovation. In this workshop, participants will gain a foundational understanding of quantum computing principles and explore its transformative potential for solving complex challenges in drug discovery. Industry leaders will share early-stage case studies showcasing how quantum computing is being applied today, providing attendees with the knowledge to engage with this rapidly-evolving field.

INSTRUCTOR BIOGRAPHIES:

Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals

Ms. Dolcetti boasts over 15 years of multifaceted expertise in Global Health Tech, Digital Innovation, and Artificial Intelligence, with a background spanning startups, Fortune 500 companies, academia, and management consulting, including a tenure at Boston Consulting Group. Specializing in life sciences, she excels in corporate strategy, private equity/venture capital, partnerships, and commercialization, showcasing a knack for successful product launches. Her subject matter expertise spans precision medicine, diagnostics, genomics, oncology, and the integration of AI, informatics, data analytics, cloud infrastructure, and SaaS solutions. A seasoned professional in navigating the convergence of healthcare and technology, Sara brings strategic acumen to the evolving landscape of digital health and medical devices. Continuously staying abreast of industry trends, she is a driving force committed to advancing healthcare through innovative technological solutions.

2025年4月2日(星期三) 下午 1:15 - 下午 4:15

W4: Making Data AI-Ready

Detailed Agenda
AI-driven analyses depend on high-quality, accessible data for accurate modeling and decision-making. This workshop digs into strategies and frameworks to ensure that AI models perform reliably, ethically, and within regulatory bounds, while maximizing data’s potential to deliver actionable insights and accelerate pharma R&D.
Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance
Anastasios Moresis, PhD, Senior Scientist, Roche Pharma
Fernanda Foertter, MSc, Oakridge National Lab
Angelika Fuchs, Chapter Lead Data Products and Platforms, pRED Data & Analytics, Roche Diagnostics GmbH
Ryan Chandler, PhD, Knowledge Graph Engineer, Research and Development, AbbVie

TOPICS TO BE COVERED:


Advancing AI-Ready Data in Life Sciences: Insights from Pistoia Alliance’s AI, Ontology, and FAIR Initiatives

Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance

The Pistoia Alliance collaborative portfolio is advancing AI-data readiness through its ontology projects, AI, and FAIR initiatives. A key resource in this endeavor is the FAIR Maturity Matrix, a framework designed to help organizations assess and enhance their FAIR capabilities which are instrumental to generate a solid foundation of AI-ready data. The Alliance’s IDMP Ontology enhances the ISO IDMP standard, enabling semantic interoperability. Additionally, the Pharma General Ontology project provides a core framework to enhance interoperability between FAIR data sets across the pharmaceutical industry. The Artificial Intelligence & Machine Learning Community focuses on defining best practices for AI and machine learning in life-sciences research. This includes developing a Best Practices Toolkit for Good Machine Learning Practices and educating members through webinars and conference presentations. By leveraging these resources and initiatives, organizations can systematically evaluate their current data practices, identify areas for improvement, and implement strategies to achieve higher levels of AI data maturity. This progression enhances data quality and accessibility, ensuring that AI applications are built on a robust and reliable data foundation which is a must in a highly regulated environment.

FAIR by Design

Anastasios Moresis, PhD, Senior Scientist, Roche Pharma

In vivo preclinical animal studies are crucial for discovering new therapeutics. However, their complexity often leads to the creation of multiple localized solutions for data capture, hindering data exchange and reuse. This poses significant challenges for data scientists aiming to gain disease insights and advance discoveries. FISH (FAIR* in vivo data SHaring) platform is a "FAIR by design" system that consolidates previously siloed solutions into a unified platform, providing standardized and context-rich metadata and results for animal studies. Utilizing globally unique persistent resolvable identifiers (GUPRIs), FISH enables seamless data access, identification, and exchange. The platform employs semantic models and standardized terminologies to ensure structured, consistent, and machine-actionable data capture across teams. Each component integrates smoothly with existing registration or Laboratory Information Management Systems (LIMS), ensuring clear ownership, entity validation, and minimizing data duplication. By providing FAIRified data, FISH unlocks the full potential of animal studies, facilitating data reuse and efficient use of ML/AI algorithms or automation of lab workflows. This approach enhances reproducibility of in vivo studies and enables the repurposing of animal data. Ultimately, it increases the probability of successful Entry into Human (EiH) trials and significantly reduces the need for additional animal testing. (FAIR: Findable, Accessible, Interoperable, Reusable)

Wrangling Health-Related Data for Analytics and AI Workloads

Fernanda Foertter, MSc, Oakridge National Lab

Reducing Data Fragmentation

Angelika Fuchs, Chapter Lead Data Products and Platforms, pRED Data & Analytics, Roche Diagnostics GmbH

Across the pharma industry, companies sit on massive amounts of data but can't leverage it for meaningful AI application as the data is processed and stored in a historically grown, siloed system landscape. We'll discuss approaches to overcome that systemic challenge through a combination of technology, culture, and mindset.

PageRank for Gene-Disease Association Ranking on AbbVie's R&D Convergence Hub: ARCH Graph

Ryan Chandler, PhD, Knowledge Graph Engineer, Research and Development, AbbVie

At AbbVie, the PageRank algorithm has emerged as a powerful method for drawing high-quality associations between genes and diseases. By leveraging our diverse and expertly curated R&D knowledge graph, ARCH, the relatively simple PageRank algorithm provides association rankings that surpass those of other world-class, purpose-built knowledge bases. This talk will focus on the knowledge structure, curation, and our next-generation analytical strategies. Some main points are: The importance of normalized and curated propositional knowledge; Weighting for clinical and novel relevance; The next generation of analytics beyond PageRank.

INSTRUCTOR BIOGRAPHIES:

Giovanni Nisato, PhD, Consultant, Project Manager FAIR implementation, Pistoia Alliance

Giovanni Nisato is a Pistoia Alliance Associate where he currently manages the FAIR implementation project. Giovanni works as a consultant for bio-pharmaceutical organizations, innovation networks and digital health start-ups. He has 25 years’ experience in collaborative innovations in international settings across diverse industries. Affiliate professor at the Grenoble School of Management’s Biopharma Program, Giovanni holds a PhD in physics and is a certified Project Management Professional (PMP/PMI).

Anastasios Moresis, PhD, Senior Scientist, Roche Pharma

10 years research experience in Molecular Neurogenetics and Circuits Neuroscience with broad domain knowledge in experimental neuroscience and analysis of molecular, imaging, electrophysiology, and behavioral data. 5 years experience in preclinical drug discovery informatics, advancing research workflows automation development, and FAIR In-vivo data management from within different roles: Business Analyst, Developer, and Product Owner (PSPO certified)

Fernanda Foertter, MSc, Oakridge National Lab

Fernanda Foertter is currently the Director of Developer Relations at Voltron Data. She previously held roles as the Senior Scientific Consultant for BioTeam and GPU Developer Advocate for Bioinformatics at NVIDIA in the Healthcare group where she fostered an emerging community in AI and GPU computing. Before NVIDIA, Foertter held roles as an HPC Data Scientist in the Biomedical Sciences and Engineering group and was an HPC Programmer and Training Coordinator at the Oak Ridge National Lab's Leadership Computing Facility. She participated in the CORAL project that selected Summit as the next supercomputer to replace Titan, was co-PI of Kokkos Exascale Computing Project, served in OpenACC and OpenMP language standards, and is the “inventor” of the GPU Hackathon training series. Other interests include the intersection of HPC and AI, facilitating data integration workflows, and productivity in scientific application development.

Angelika Fuchs, Chapter Lead Data Products and Platforms, pRED Data & Analytics, Roche Diagnostics GmbH

With >10 years experience in Research Informatics, a passion for science and human-centric digitalization in drug discovery, Angelika Fuchs is currently leading the Data Products & Platforms chapter in Data & Analytics of Pharma Research and Early Development.The chapter brings together all competencies required to design, build, operate and evolve pRED's digital landscape and aims to enhance the full scientific data pipeline from structured data capture to powerful data integration and efficient data interrogation in order to create and develop successful drug molecules as efficiently as possible. Before the current role, Angelika led the Discovery Informatics organization in Roche pRED as well as several global research informatics projects in the space of Digital Pathology and Lab Automation.

Ryan Chandler, PhD, Knowledge Graph Engineer, Research and Development, AbbVie

Ryan Chandler is a Knowledge Graph Engineer at AbbVie. He holds a PhD in Informatics from the University of Illinois, with a focus on the linguistic and cognitive aspects of knowledge representation. Ryan has dedicated his career to understanding what it means for computers to effectively "know" information. His work at AbbVie centers on developing semantic knowledge graphs and analytic solutions for research and development. He enables research scientists to explore and uncover meaningful insights from large bodies of previously unrelated knowledge and data sources.

W5: Advanced Applications and Roadmap for Quantum Computing in Pharma

Detailed Agenda
Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals
1:15 pm

Advanced Applications and Roadmap for Quantum Computing in Pharma

Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals

Building on the foundational concepts introduced in the morning workshop, this advanced workshop explores real-world case studies from industry leaders in hardware innovation, pharma quantum teams, and virtual drug discovery. Attendees will delve deeper into breakthrough applications and learn how to overcome current challenges in adopting quantum technologies. The session concludes with an interactive roundtable discussion on the future roadmap, offering participants an opportunity to collaborate on shaping the next generation of quantum-driven drug development.

INSTRUCTOR BIOGRAPHIES:

Sara Dolcetti, Vice President of Business Development, Qubit Pharmaceuticals

Ms. Dolcetti boasts over 15 years of multifaceted expertise in Global Health Tech, Digital Innovation, and Artificial Intelligence, with a background spanning startups, Fortune 500 companies, academia, and management consulting, including a tenure at Boston Consulting Group. Specializing in life sciences, she excels in corporate strategy, private equity/venture capital, partnerships, and commercialization, showcasing a knack for successful product launches. Her subject matter expertise spans precision medicine, diagnostics, genomics, oncology, and the integration of AI, informatics, data analytics, cloud infrastructure, and SaaS solutions. A seasoned professional in navigating the convergence of healthcare and technology, Sara brings strategic acumen to the evolving landscape of digital health and medical devices. Continuously staying abreast of industry trends, she is a driving force committed to advancing healthcare through innovative technological solutions.

W6: AI in Antibody Design

Detailed Agenda
Artificial intelligence is a promising tool for tackling challenging drug targets. This workshop will discuss AI’s role in accelerating the discovery and design process, including data integration, data generation, predictive algorithms, and applications.
Rahmad Akbar, PhD, Senior Data Scientist, Antibody Design, Novo Nordisk
Magnus Haraldson Hoie, Visiting Scientist, Antibody Design, Novo Nordisk
1:15 pm

AI in Antibody Design

Rahmad Akbar, PhD, Senior Data Scientist, Antibody Design, Novo Nordisk

Magnus Haraldson Hoie, Visiting Scientist, Antibody Design, Novo Nordisk

Artificial intelligence is a promising tool for tackling challenging drug targets. This workshop will discuss AI’s role in accelerating the discovery and design process, including data integration, data generation,  predictive algorithms, and applications.

INSTRUCTOR BIOGRAPHIES:

Rahmad Akbar, PhD, Senior Data Scientist, Antibody Design, Novo Nordisk

At Novo Nordisk, Rahmad enables patients to realize their greatest potential by catalysing antibody design. He leverages experimental data, molecular simulation, and artificial intelligence to build computational oracles and to design antibody therapeutics faster, smarter, and cheaper.

Magnus Haraldson Hoie, Visiting Scientist, Antibody Design, Novo Nordisk

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* 活动内容有可能不事先告知作更动及调整。